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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
2
WGBS
1
ATAC-seq
1
pCHi-C
1
total RNA-seq
Assay category
8
DNA binding
2
DNA methylation
1
DNA accessibility
1
Transcription
Target of assay
8
control
Date released
5
November, 2018
4
December, 2018
1
February, 2020
1
January, 2019
1
March, 2020
1
October, 2017
Available data
24
bam
24
fastq
16
bigWig
14
bed narrowPeak
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
13
Homo sapiens
Biosample type
13
tissue
Organ
846
pancreas
655
connective tissue
481
adipose tissue
440
epithelium
429
liver
296
heart
249
kidney
159
bone element
156
brain
148
vasculature
146
blood vessel
116
artery
55
eye
43
musculature of body
37
embryo
34
limb
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
12
spleen
7
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
13
AMP
Genome assembly (visualization)
3
GRCh38
1
hg19
Lab
13
AMP-T2D consortium
assay_title!
Hi-C
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
13 results
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Clear Filters
ChIP-seq
WGBS
ATAC-seq
pCHi-C
total RNA-seq
tissue
spleen
8
2
1
1
C1 segment of cervical spinal cord
1
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