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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
2
DNase-seq
Hi-C
1
FAIRE-seq
1
pCHi-C
Assay category
11
DNA binding
3
DNA accessibility
Target of assay
19
histone
19
histone modification
narrow histone mark
9
broad histone mark
2
control
Date released
14
October, 2019
1
March, 2020
Available data
14
bam
10
bigWig
8
bed narrowPeak
8
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
1
tar
1
tsv
Organism
15
Homo sapiens
Biosample type
14
primary cell
1
tissue
Organ
864
pancreas
727
liver
650
connective tissue
479
adipose tissue
467
epithelium
350
heart
338
kidney
205
vasculature
200
blood vessel
166
brain
159
bone element
135
artery
103
limb
77
musculature of body
68
blood
68
bodily fluid
58
eye
35
nerve
29
embryo
23
spleen
20
lung
18
ureter
16
skeleton
14
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
15
AMP
Genome assembly (visualization)
10
hg19
7
GRCh38
Lab
15
AMP-T2D consortium
assay_title!
Hi-C
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
15 results
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Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
pCHi-C
primary cell
endothelial cell of umbilical vein
11
2
1
tissue
ovary
1
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