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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
364
total RNA-seq
80
single cell RNA-seq
2
small RNA-seq
Assay category
446
Transcription
190
DNA binding
153
DNA accessibility
53
DNA methylation
7
3D chromatin structure
Date released
157
July, 2018
89
August, 2017
42
February, 2023
39
April, 2018
37
May, 2021
26
September, 2018
19
November, 2019
16
September, 2020
6
May, 2022
4
July, 2019
3
August, 2018
3
March, 2020
2
October, 2018
1
August, 2021
1
February, 2020
1
June, 2018
Available data
379
bam
375
tsv
373
bigWig
253
fastq
6
txt
Organism
446
Homo sapiens
Biosample type
291
tissue
155
primary cell
cell line
Organ
481
connective tissue
446
pancreas
401
adipose tissue
179
liver
167
epithelium
121
kidney
114
heart
62
bone element
24
brain
19
eye
15
blood vessel
15
vasculature
9
lung
9
musculature of body
7
limb
6
artery
6
embryo
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
386
AMP
53
HPAP
7
T1D
Genome assembly (visualization)
373
GRCh38
373
hg19
Lab
380
AMP-T2D consortium
53
Klaus Kaestner, Upenn
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
5
inconsistent ontology term
assay_title!
HiChIP
biosample_type!
cell line
BIOSAMPLE
ASSAY
446 results
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Clear Filters
total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
islet of Langerhans
278
6
body of pancreas
3
2
pancreas
2
primary cell
pancreatic alpha cell
52
12
pancreatic beta cell
21
12
pancreatic acinar cell
4
12
pancreatic ductal cell
4
10
pancreatic delta cell
11
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