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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
Hi-C
2
pCHi-C
Assay category
5
3D chromatin structure
Date released
4
March, 2020
2
October, 2019
1
November, 2019
Available data
208
bam
188
bigWig
150
tsv
85
txt
59
bed narrowPeak
20
bigBed narrowPeak
11
fastq
7
bedpe bed3+
5
hic
3
tagAlign
2
bed bed3+
2
bed bedMethyl
2
bigBed bedMethyl
2
ibed
1
bed bedgraph
Organism
7
Homo sapiens
Biosample type
6
in vitro differentiated cells
1
cell line
Organ
1
epithelium
1
pancreas
Project
7
AMP
Genome assembly (visualization)
7
hg19
Lab
7
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
3
audit script error
assay_title!
HiChIP
DNase-seq
BIOSAMPLE
ASSAY
7 results
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Hi-C
pCHi-C
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
1
lymphocyte of B lineage (iPSC)
1
1
cardiac precursors (cardiac muscle cell)
1
cell line
EndoC_BH1
1
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