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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
Hi-C
Assay category
13
3D chromatin structure
Date released
7
March, 2020
2
August, 2021
1
March, 2019
1
March, 2023
1
November, 2019
1
October, 2019
Available data
2808
bam
2629
bigWig
1552
bed narrowPeak
1315
tsv
979
fastq
963
bigBed narrowPeak
354
tagAlign
299
bed broadPeak
262
bigBed broadPeak
227
bed bed3+
158
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
13
hic
11
bedpe bed3+
8
csv
7
bed bed3
3
hdf5
3
tar
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
13
Homo sapiens
Biosample type
11
tissue
in vitro differentiated cells
1
cell line
1
primary cell
Organ
7
pancreas
epithelium
3
blood vessel
3
heart
3
vasculature
2
liver
2
musculature of body
2
vein
1
kidney
Project
12
AMP
1
ITG
Genome assembly (visualization)
12
hg19
1
GRCh38
Lab
9
AMP-T2D consortium
2
Bing Ren, UCSD
1
ITG
1
Katalin Susztak, Upenn
assay_title!
HiChIP
biosample_type!
in vitro differentiated cells
organ_slims!
epithelium
BIOSAMPLE
ASSAY
13 results
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Hi-C
tissue
islet of Langerhans
2
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
+ See 4 more…
cell line
HepG2
1
primary cell
chondrocytes
1
See all biosamples
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