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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
121
ChIP-seq
Assay category
121
DNA binding
Target of assay
234
histone
234
histone modification
121
broad histone mark
113
narrow histone mark
34
control
10
RNA binding protein
10
transcription factor
1
chromatin remodeller
Date released
66
May, 2021
17
September, 2018
16
August, 2017
12
October, 2019
8
June, 2019
2
May, 2019
Available data
117
bigWig
111
bed narrowPeak
99
bam
50
tagAlign
33
fastq
21
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
Organism
121
Homo sapiens
Biosample type
278
tissue
121
primary cell
49
in vitro differentiated cells
10
cell line
1
stem cell
Organ
31
epithelium
27
pancreas
9
blood vessel
9
vasculature
9
vein
5
kidney
4
connective tissue
4
musculature of body
liver
Project
77
AMP
44
T1D
Genome assembly (visualization)
117
hg19
95
GRCh38
Lab
64
Kyle Gaulton, UCSD
57
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
1
inconsistent assembly
assay_title!
HiChIP
organ_slims!
liver
BIOSAMPLE
ASSAY
121 results
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ChIP-seq
primary cell
monocyte
44
CD8-positive, alpha-beta T cell
20
pancreatic endocrine cell
11
endothelial cell of umbilical vein
9
pancreatic ductal cell
6
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