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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
7
total RNA-seq
4
Hi-C
1
WGBS
1
pCHi-C
Assay category
70
DNA binding
DNA accessibility
7
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
53
histone
53
histone modification
34
broad histone mark
19
narrow histone mark
17
control
Date released
67
October, 2019
7
May, 2019
5
July, 2019
3
February, 2020
1
March, 2020
Available data
70
bam
53
bigWig
48
bed narrowPeak
48
bigBed narrowPeak
8
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
83
Homo sapiens
Biosample type
83
tissue
Organ
773
pancreas
762
liver
650
connective tissue
483
adipose tissue
401
epithelium
316
heart
249
brain
191
kidney
178
vasculature
174
blood vessel
147
bone element
92
artery
78
limb
61
musculature of body
60
blood
60
bodily fluid
40
nerve
37
embryo
29
eye
23
spleen
19
vein
10
lung
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
83
AMP
Genome assembly (visualization)
52
GRCh38
52
hg19
Lab
83
AMP-T2D consortium
assay_title!
HiChIP
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
83 results
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ChIP-seq
total RNA-seq
Hi-C
WGBS
pCHi-C
tissue
tibial nerve
35
5
tibial artery
23
1
muscle of leg
7
1
gastrocnemius medialis
1
4
islet of Langerhans
5
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