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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
Assay category
55
DNA binding
Target of assay
47
transcription factor
17
histone
17
histone modification
narrow histone mark
8
broad histone mark
7
RNA binding protein
4
chromatin remodeller
1
other context
1
other post-translational modification
Date released
187
June, 2019
55
November, 2017
10
August, 2017
9
November, 2018
9
October, 2019
1
November, 2020
Available data
363
bam
314
fastq
304
bigWig
284
bed narrowPeak
284
bigBed narrowPeak
57
bed broadPeak
55
bigBed broadPeak
52
tagAlign
3
tar
Organism
55
Homo sapiens
Biosample type
52
cell line
3
primary cell
Organ
52
liver
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
55
AMP
Genome assembly (visualization)
55
hg19
42
GRCh38
Lab
55
AMP-T2D consortium
Audit category:
8
inconsistent control read length
assay_title!
HiChIP
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
55 results
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ChIP-seq
cell line
HepG2
52
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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