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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
175
ChIP-seq
89
total RNA-seq
9
WGBS
5
RRBS
2
ATAC-seq
2
DNase-seq
1
FAIRE-seq
Assay category
175
DNA binding
89
Transcription
14
DNA methylation
5
DNA accessibility
Target of assay
123
histone modification
122
histone
72
broad histone mark
50
narrow histone mark
29
control
23
transcription factor
2
RNA binding protein
Date released
545
February, 2021
283
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
177
bigWig
174
fastq
169
bam
89
tsv
65
bed narrowPeak
58
tagAlign
26
bed bed3+
25
bed broadPeak
21
bigBed narrowPeak
5
bed bedMethyl
5
bigBed bedMethyl
Organism
277
Homo sapiens
Biosample type
283
tissue
68
in vitro differentiated cells
57
primary cell
Organ
146
pancreas
57
adipose tissue
57
connective tissue
54
liver
26
musculature of body
Project
283
AMP
Genome assembly (visualization)
179
hg19
157
GRCh38
Lab
283
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
5
inconsistent control read length
inconsistent assembly
assay_title!
MPRA
audit.WARNING.category!
inconsistent assembly
BIOSAMPLE
ASSAY
283 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
42
89
1
1
liver
48
3
1
subcutaneous abdominal adipose tissue
36
3
skeletal muscle tissue
22
4
pancreas
13
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