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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
total RNA-seq
12
ATAC-seq
9
WGBS
6
RRBS
5
DNase-seq
1
FAIRE-seq
Assay category
DNA binding
89
Transcription
18
DNA accessibility
15
DNA methylation
Date released
707
February, 2021
291
May, 2020
276
August, 2021
234
May, 2021
205
February, 2023
200
May, 2022
187
June, 2019
168
July, 2018
115
August, 2017
108
July, 2019
72
October, 2019
61
March, 2020
59
September, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
25
February, 2020
19
April, 2020
18
November, 2018
16
January, 2021
16
November, 2020
15
February, 2018
15
May, 2023
10
December, 2019
8
January, 2018
8
October, 2017
7
August, 2020
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
August, 2022
1
December, 2018
Available data
113
fastq
108
bigWig
101
bam
89
tsv
10
bed narrowPeak
10
bigBed narrowPeak
6
bed bedMethyl
6
bigBed bedMethyl
2
bed broadPeak
2
bigBed broadPeak
Organism
122
Homo sapiens
Biosample type
108
tissue
13
primary cell
1
in vitro differentiated cells
Organ
101
pancreas
10
epithelium
8
connective tissue
7
adipose tissue
6
liver
4
musculature of body
Project
115
AMP
7
HPAP
Genome assembly (visualization)
105
GRCh38
103
hg19
Lab
115
AMP-T2D consortium
7
Klaus Kaestner, Upenn
assay_title!
MPRA
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
122 results
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total RNA-seq
ATAC-seq
WGBS
RRBS
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
89
1
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
subcutaneous abdominal adipose tissue
3
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primary cell
pancreatic alpha cell
6
pancreatic beta cell
3
skeletal muscle myoblast
1
2
pancreatic acinar cell
1
in vitro differentiated cells
adipocyte
1
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