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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
5
RRBS
5
total RNA-seq
2
Hi-C
2
small RNA-seq
1
ATAC-seq
1
DNase-seq
1
pCHi-C
1
single cell RNA-seq
1
snATAC-seq
Assay category
32
DNA binding
Target of assay
27
histone
27
histone modification
16
broad histone mark
11
narrow histone mark
5
control
Date released
22
August, 2017
10
June, 2019
Available data
21
bed narrowPeak
21
bigWig
15
tagAlign
13
bed broadPeak
10
bam
8
bigBed narrowPeak
Organism
32
Homo sapiens
Biosample type
22
tissue
10
primary cell
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
134
heart
129
epithelium
102
vasculature
99
blood vessel
73
adipose tissue
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
32
AMP
Genome assembly (visualization)
21
hg19
8
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
assay_title!
MPRA
organ_slims!
limb
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
tissue
skeletal muscle tissue
22
primary cell
skeletal muscle satellite cell
8
skeletal muscle cell
2
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