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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
59
total RNA-seq
13
single cell RNA-seq
MPRA
Assay category
72
Transcription
Date released
89
February, 2021
57
August, 2021
6
May, 2022
4
February, 2023
Available data
394
bam
350
fastq
219
bed narrowPeak
197
tsv
160
tagAlign
156
txt
153
bigWig
153
zippedFastqFolder
79
bigBed narrowPeak
64
xls
24
bed broadPeak
23
bed bed3+
23
bigBed broadPeak
17
bed bedMethyl
17
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
hic
1
vcf
Organism
156
Homo sapiens
Biosample type
156
tissue
Organ
88
bone element
62
kidney
6
pancreas
4
skeleton
Project
156
AMP
Genome assembly (visualization)
hg19
Lab
93
AMP-T2D consortium
57
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
5
audit script error
assay_title!
MPRA
organ_slims!
lung
assembly!
hg19
BIOSAMPLE
ASSAY
156 results
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RNA microarray
total RNA-seq
single cell RNA-seq
tissue
bone element
84
kidney
49
13
islet of Langerhans
6
acetabular part of hip bone
1
ilium
1
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