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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
79
ChIP-seq
Assay category
79
DNA binding
Target of assay
52
histone
52
histone modification
28
narrow histone mark
27
transcription factor
24
broad histone mark
4
chromatin remodeller
2
RNA binding protein
Date released
39
August, 2017
32
September, 2018
3
November, 2017
3
October, 2017
2
November, 2018
Available data
79
bam
79
bigWig
79
fastq
41
bed narrowPeak
14
bed bed3+
8
bigBed narrowPeak
3
tagAlign
2
bed broadPeak
Organism
79
Homo sapiens
Biosample type
44
primary cell
25
tissue
5
cell line
5
in vitro differentiated cells
Organ
54
pancreas
21
epithelium
17
connective tissue
12
adipose tissue
5
liver
3
brain
Project
79
AMP
Genome assembly (visualization)
86
hg19
79
GRCh38
Lab
79
AMP-T2D consortium
Audit category:
79
missing controlled_by
Audit category:
4
inconsistent control read length
4
inconsistent control run_type
assay_title!
MeRIP-seq
BIOSAMPLE
ASSAY
79 results
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ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
tissue
white adipose tissue
12
islet of Langerhans
10
brain
3
cell line
HepG2
5
in vitro differentiated cells
adipocyte
5
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