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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
single cell RNA-seq
41
WGBS
39
ATAC-seq
snATAC-seq
Assay category
52
Transcription
41
DNA methylation
39
DNA accessibility
Date released
113
May, 2022
19
September, 2020
Available data
3389
bam
3166
bigWig
1815
bed narrowPeak
1596
tsv
1327
fastq
1042
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
269
bed bed3+
160
txt
132
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
132
Homo sapiens
Biosample type
132
primary cell
Organ
80
epithelium
80
pancreas
Project
132
HPAP
Lab
132
Klaus Kaestner, Upenn
assay_title!
MeRIP-seq
snATAC-seq
biosample_type!
stem cell
BIOSAMPLE
ASSAY
132 results
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single cell RNA-seq
WGBS
ATAC-seq
primary cell
Langerhans cell
52
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
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