Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
207
ChIP-seq
26
ATAC-seq
22
total RNA-seq
2
Hi-C
Assay category
207
DNA binding
26
DNA accessibility
22
Transcription
2
3D chromatin structure
Target of assay
132
histone
132
histone modification
83
broad histone mark
54
control
49
narrow histone mark
21
transcription factor
17
RNA binding protein
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
6
November, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
255
bam
179
bed narrowPeak
175
bigWig
142
bigBed narrowPeak
60
fastq
22
tsv
2
bedpe bed3+
2
hic
Organism
257
Homo sapiens
Biosample type
229
tissue
16
cell line
7
primary cell
5
in vitro differentiated cells
Organ
110
pancreas
50
blood vessel
50
vasculature
28
brain
24
adipose tissue
24
connective tissue
23
epithelium
21
heart
7
limb
7
musculature of body
5
artery
5
kidney
Project
257
AMP
Genome assembly (visualization)
203
hg19
200
GRCh38
Lab
257
AMP-T2D consortium
Audit category:
25
inconsistent ontology term
Audit category:
1
inconsistent control read length
assay_title!
MeRIP-seq
BIOSAMPLE
ASSAY
257 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
19
19
1
body of pancreas
35
ascending aorta
16
endocrine pancreas
16
thoracic aorta
16
+ See 12 more…
cell line
EndoC_BH1
13
1
1
1
primary cell
kidney epithelial cell
5
pancreatic acinar cell
2
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
See all biosamples
Download