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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
5
pCHi-C
2
ChIP-seq
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
2
DNA binding
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
31
February, 2023
21
October, 2019
1
February, 2020
1
July, 2019
1
March, 2020
Available data
33
bed narrowPeak
bam
6
bigBed narrowPeak
6
bigWig
6
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
55
Homo sapiens
Biosample type
54
tissue
1
primary cell
Organ
257
pancreas
208
kidney
206
epithelium
182
heart
110
liver
90
connective tissue
54
eye
51
vasculature
50
blood vessel
48
adipose tissue
43
brain
39
artery
39
musculature of body
20
lung
9
blood
9
bodily fluid
9
bone element
8
limb
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
55
AMP
Genome assembly (visualization)
28
hg19
Lab
55
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
RNA microarray
files.file_type!
bam
BIOSAMPLE
ASSAY
55 results
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Clear Filters
ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
1
14
4
2
retina
15
3
pigmented layer of retina
12
2
bladder (urinary bladder)
1
primary cell
retinal pigment epithelial cell
1
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