Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
5
Hi-C
3
total RNA-seq
1
RRBS
1
pCHi-C
Assay category
35
DNA accessibility
5
3D chromatin structure
3
Transcription
1
DNA methylation
Date released
35
February, 2023
August, 2021
3
February, 2020
3
July, 2019
3
March, 2020
1
October, 2019
Available data
bam
155
bigWig
133
bed narrowPeak
83
bigBed narrowPeak
62
tsv
17
bed broadPeak
17
bigBed broadPeak
13
bed bed3+
6
fastq
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
45
Homo sapiens
Biosample type
40
tissue
5
primary cell
Organ
253
pancreas
204
epithelium
90
heart
86
connective tissue
79
liver
78
kidney
54
eye
48
adipose tissue
45
vasculature
44
blood vessel
43
brain
39
musculature of body
37
artery
20
lung
9
blood
9
bodily fluid
9
bone element
8
limb
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
45
AMP
Genome assembly (visualization)
35
GRCh38
6
hg19
Lab
45
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
RNA microarray
files.file_type!
bam
month_released!
August, 2021
BIOSAMPLE
ASSAY
45 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
Hi-C
total RNA-seq
RRBS
pCHi-C
tissue
coronary artery
35
1
aorta
1
1
ascending aorta
1
tibial artery
1
primary cell
endothelial cell of umbilical vein
2
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
endothelial cell of hepatic sinusoid
1
Download