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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
RNA microarray
62
total RNA-seq
12
ATAC-seq
4
ChIP-seq
2
pCHi-C
Assay category
62
Transcription
12
DNA accessibility
4
DNA binding
Target of assay
4
histone
4
histone modification
4
narrow histone mark
Date released
66
February, 2021
8
February, 2023
4
October, 2019
1
March, 2020
1
May, 2021
Available data
66
bam
59
tsv
58
bigWig
8
bed narrowPeak
4
bed bed3
4
txt
Organism
80
Homo sapiens
Biosample type
79
tissue
1
primary cell
Organ
939
pancreas
789
liver
682
connective tissue
518
epithelium
489
adipose tissue
390
heart
352
kidney
286
brain
234
vasculature
228
blood vessel
141
artery
122
limb
94
musculature of body
75
bone element
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
21
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
79
AMP
1
T1D
Genome assembly (visualization)
70
hg19
66
GRCh38
Lab
79
AMP-T2D consortium
1
Kyle Gaulton, UCSD
assay_title!
RNA microarray
files.file_type!
bedpe bed3+
BIOSAMPLE
ASSAY
80 results
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total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
bone tissue
58
islet of Langerhans
4
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
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primary cell
megakaryocyte
1
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