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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
WGBS
9
RRBS
2
pCHi-C
Assay category
26
DNA methylation
Date released
14
July, 2019
7
November, 2018
5
August, 2017
2
March, 2020
Available data
2783
bam
2556
bigWig
1522
bed narrowPeak
1328
tsv
949
fastq
933
bigBed narrowPeak
298
tagAlign
273
bed broadPeak
236
bed bed3+
236
bigBed broadPeak
77
txt
64
xls
26
bed bedMethyl
26
bigBed bedMethyl
19
bedpe bed3+
17
hic
11
bed bed3
7
bed bedgraph
6
csv
3
tar
2
ibed
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
28
Homo sapiens
Biosample type
25
tissue
primary cell
2
in vitro differentiated cells
1
cell line
Organ
7
heart
6
pancreas
3
musculature of body
2
adipose tissue
2
connective tissue
2
liver
2
spleen
1
blood vessel
1
brain
1
kidney
1
limb
1
pericardium
1
vasculature
Project
28
AMP
Genome assembly (visualization)
17
GRCh38
11
hg19
Lab
28
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
RNA microarray
biosample_type!
primary cell
BIOSAMPLE
ASSAY
28 results
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WGBS
RRBS
pCHi-C
tissue
heart left ventricle
2
1
pancreas
2
1
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 11 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
cell line
HepG2
1
See all biosamples
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