Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
total RNA-seq
4
ATAC-seq
1
Hi-C
Assay category
45
Transcription
4
DNA accessibility
1
3D chromatin structure
Date released
235
May, 2021
198
May, 2022
168
August, 2021
102
February, 2023
59
September, 2020
47
September, 2023
45
February, 2021
45
May, 2020
40
May, 2024
19
April, 2020
16
January, 2021
14
May, 2023
10
November, 2020
7
August, 2020
5
March, 2019
5
March, 2023
3
October, 2022
1
October, 2017
Available data
46
bam
45
bigWig
45
tsv
1
bed broadPeak
1
bedpe
1
fastq
1
hic
Organism
50
Homo sapiens
Biosample type
45
primary cell
5
tissue
Organ
5
pancreas
Project
45
T1D
5
AMP
Genome assembly (visualization)
48
hg19
47
GRCh38
Lab
AMP-T2D consortium
45
Kyle Gaulton, UCSD
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
Audit category:
4
inconsistent ontology term
assay_title!
RNA microarray
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
50 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
Hi-C
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
+ See 20 more…
tissue
islet of Langerhans
4
1
See all biosamples
Download