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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
1
ATAC-seq
Assay category
59
DNA binding
1
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
1
histone
histone modification
1
narrow histone mark
Date released
27
December, 2018
17
January, 2019
15
November, 2018
1
January, 2018
Available data
59
bam
59
fastq
54
bigWig
53
bed narrowPeak
53
bigBed narrowPeak
Organism
60
Homo sapiens
Biosample type
60
cell line
Organ
744
pancreas
688
liver
604
connective tissue
458
adipose tissue
430
epithelium
322
kidney
296
heart
165
vasculature
160
blood vessel
121
artery
99
brain
74
bone element
73
limb
63
musculature of body
60
blood
60
bodily fluid
58
eye
25
embryo
20
lung
19
nerve
19
spleen
18
ureter
16
skeleton
7
vein
2
intestine
2
pericardium
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
60
AMP
Genome assembly (visualization)
54
hg19
53
GRCh38
Lab
60
AMP-T2D consortium
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
assay_title!
RNA microarray
lab.title!
Kyle Gaulton, UCSD
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
60 results
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ChIP-seq
ATAC-seq
cell line
GM12878
59
1
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