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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
19
total RNA-seq
5
ChIP-seq
4
DNase-seq
4
pCHi-C
RRBS
Assay category
19
Transcription
5
DNA binding
4
DNA accessibility
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
20
October, 2019
7
June, 2019
4
February, 2023
1
February, 2020
Available data
7
bam
6
bed narrowPeak
6
bigBed narrowPeak
6
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
32
Homo sapiens
Biosample type
28
tissue
4
primary cell
Organ
792
pancreas
766
liver
658
connective tissue
485
adipose tissue
415
epithelium
304
heart
280
brain
275
kidney
189
vasculature
184
blood vessel
147
bone element
114
limb
96
artery
90
musculature of body
68
blood
68
bodily fluid
42
nerve
37
embryo
32
eye
24
spleen
22
vein
20
lung
18
ureter
5
gonad
5
ovary
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
32
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
32
AMP-T2D consortium
assay_title!
RRBS
ATAC-seq
BIOSAMPLE
ASSAY
32 results
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Clear Filters
total RNA-seq
ChIP-seq
DNase-seq
pCHi-C
tissue
islet of Langerhans
14
2
4
retina
3
3
pigmented layer of retina
2
primary cell
retinal pigment epithelial cell
3
1
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