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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
4
pCHi-C
3
ChIP-seq
RRBS
Assay category
28
DNA accessibility
19
Transcription
3
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
Date released
31
February, 2023
21
October, 2019
1
February, 2020
1
June, 2019
Available data
27
bed narrowPeak
5
tsv
1
bam
Organism
54
Homo sapiens
Biosample type
53
tissue
1
primary cell
Organ
302
pancreas
256
liver
219
epithelium
145
kidney
122
heart
116
connective tissue
93
bone element
67
brain
66
adipose tissue
54
eye
42
vasculature
41
blood vessel
36
musculature of body
26
limb
20
lung
15
blood
15
bodily fluid
13
artery
12
nerve
9
spleen
9
vein
8
embryo
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
54
AMP
Genome assembly (visualization)
33
hg19
GRCh38
Lab
54
AMP-T2D consortium
assay_title!
RRBS
DNAme array
files.file_type!
bedpe bed3+
assembly!
GRCh38
BIOSAMPLE
ASSAY
54 results
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ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
tissue
islet of Langerhans
1
14
4
2
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
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