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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
5
DNase-seq
3
Hi-C
3
single cell RNA-seq
RRBS
Assay category
9
DNA binding
5
DNA accessibility
3
3D chromatin structure
3
Transcription
Target of assay
6
control
3
RNA binding protein
3
histone
3
histone modification
3
narrow histone mark
3
transcription factor
Date released
9
November, 2017
6
July, 2019
5
June, 2019
Available data
20
bigWig
17
bam
11
bed broadPeak
11
bed narrowPeak
11
bigBed broadPeak
11
bigBed narrowPeak
9
fastq
8
bed bed3+
3
hdf5
3
tsv
Organism
20
Homo sapiens
Biosample type
264
tissue
20
primary cell
Organ
400
epithelium
346
pancreas
38
connective tissue
36
vasculature
33
kidney
31
blood vessel
22
vein
20
brain
13
liver
13
musculature of body
12
heart
8
blood
8
bodily fluid
4
eye
2
adipose tissue
2
artery
1
bone element
1
bone marrow
1
pericardium
Project
20
AMP
Genome assembly (visualization)
20
hg19
14
GRCh38
Lab
20
AMP-T2D consortium
assay_title!
RRBS
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
DNase-seq
Hi-C
single cell RNA-seq
primary cell
astrocyte of the cerebellum
3
1
1
brain microvascular endothelial cell
3
1
1
choroid plexus epithelial cell
3
1
brain pericyte
1
1
cerebellar granule cell
2
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