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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
4
pCHi-C
3
ChIP-seq
RRBS
Assay category
28
DNA accessibility
19
Transcription
3
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
Date released
31
February, 2023
21
October, 2019
1
February, 2020
1
June, 2019
Available data
33
bed narrowPeak
7
bam
bigBed narrowPeak
6
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
54
Homo sapiens
Biosample type
53
tissue
1
primary cell
Organ
853
pancreas
655
connective tissue
481
adipose tissue
442
epithelium
431
liver
257
heart
246
kidney
159
bone element
157
brain
152
vasculature
151
blood vessel
116
artery
54
eye
44
musculature of body
38
limb
37
embryo
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
12
spleen
9
vein
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
54
AMP
Genome assembly (visualization)
27
hg19
Lab
54
AMP-T2D consortium
assay_title!
RRBS
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
54 results
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Clear Filters
ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
tissue
islet of Langerhans
1
14
4
2
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
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