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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
ChIP-seq
3
ATAC-seq
2
DNase-seq
RRBS
Assay category
53
DNA binding
5
DNA accessibility
Target of assay
38
histone
38
histone modification
22
narrow histone mark
16
broad histone mark
13
control
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
154
May, 2021
134
May, 2022
102
May, 2020
76
February, 2023
59
September, 2020
58
August, 2017
55
June, 2019
47
September, 2018
41
February, 2021
32
October, 2019
9
November, 2017
8
January, 2021
7
August, 2020
5
May, 2019
5
September, 2017
4
August, 2021
4
July, 2019
3
October, 2022
2
November, 2020
1
March, 2020
1
March, 2023
1
November, 2018
Available data
58
bam
57
fastq
46
bigWig
33
bed narrowPeak
19
bigBed narrowPeak
14
bed broadPeak
14
bigBed broadPeak
12
tagAlign
Organism
58
Homo sapiens
Biosample type
190
tissue
68
in vitro differentiated cells
58
primary cell
Organ
41
pancreas
29
epithelium
Project
58
AMP
Genome assembly (visualization)
46
hg19
42
GRCh38
Lab
58
AMP-T2D consortium
Audit category:
12
missing controlled_by
Audit category:
5
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
assay_title!
RRBS
files.file_type!
tsv
BIOSAMPLE
ASSAY
58 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
primary cell
skeletal muscle myoblast
15
2
pancreatic alpha cell
13
1
pancreatic beta cell
13
1
pancreatic endocrine cell
12
pancreatic acinar cell
1
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