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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
total RNA-seq
17
small RNA-seq
4
Hi-C
3
single cell RNA-seq
2
ATAC-seq
2
FAIRE-seq
2
WGBS
Assay category
54
Transcription
4
3D chromatin structure
4
DNA accessibility
2
DNA methylation
Target of assay
3
control
Date released
495
February, 2021
334
November, 2017
300
May, 2021
272
August, 2017
260
May, 2020
200
October, 2019
177
June, 2019
164
July, 2018
82
May, 2019
80
November, 2018
72
December, 2017
72
September, 2018
64
July, 2019
49
April, 2018
47
August, 2021
47
October, 2018
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
May, 2022
18
April, 2019
18
March, 2020
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
64
bigWig
61
bam
54
tsv
4
bed bed3+
4
hdf5
3
bed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed narrowPeak
Organism
64
Homo sapiens
Biosample type
46
tissue
18
primary cell
Organ
heart
17
connective tissue
16
brain
12
adipose tissue
10
blood vessel
10
vasculature
8
liver
7
epithelium
7
kidney
5
musculature of body
4
pancreas
3
artery
1
limb
1
pericardium
Project
64
AMP
Genome assembly (visualization)
61
hg19
58
GRCh38
Lab
64
AMP-T2D consortium
assay_title!
RRBS
organ_slims!
heart
BIOSAMPLE
ASSAY
64 results
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total RNA-seq
small RNA-seq
Hi-C
single cell RNA-seq
ATAC-seq
FAIRE-seq
WGBS
tissue
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
right lobe of liver
2
2
frontal cortex
1
1
1
+ See 15 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
+ See 10 more…
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