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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
total RNA-seq
16
small RNA-seq
RRBS
12
WGBS
8
Hi-C
6
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
Assay category
61
Transcription
12
DNA methylation
8
3D chromatin structure
8
DNA accessibility
Target of assay
3
control
Date released
683
February, 2021
406
November, 2017
341
May, 2020
338
May, 2021
315
August, 2021
296
October, 2019
217
August, 2017
214
June, 2019
149
February, 2023
118
May, 2019
96
May, 2022
94
December, 2017
89
July, 2019
81
November, 2018
80
April, 2019
50
March, 2020
47
September, 2023
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2018
19
April, 2020
18
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
81
bigWig
78
bam
61
tsv
8
bed bedMethyl
8
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
89
Homo sapiens
Biosample type
67
tissue
22
primary cell
Organ
23
heart
17
connective tissue
16
brain
12
adipose tissue
11
blood vessel
11
vasculature
9
liver
9
musculature of body
7
epithelium
7
kidney
5
limb
pancreas
3
artery
1
pericardium
Project
89
AMP
Genome assembly (visualization)
75
GRCh38
72
hg19
Lab
89
AMP-T2D consortium
assay_title!
RRBS
organ_slims!
pancreas
BIOSAMPLE
ASSAY
89 results
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total RNA-seq
small RNA-seq
WGBS
Hi-C
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
4
2
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
gastrocnemius medialis
4
+ See 21 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
+ See 14 more…
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