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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
7
DNase-seq
3
WGBS
1
single cell RNA-seq
Assay category
55
DNA binding
7
DNA accessibility
3
DNA methylation
1
Transcription
Target of assay
52
transcription factor
19
RNA binding protein
16
recombinant protein
5
chromatin remodeller
3
control
3
other context
3
other post-translational modification
Date released
683
February, 2021
406
November, 2017
341
May, 2020
338
May, 2021
315
August, 2021
296
October, 2019
217
August, 2017
214
June, 2019
149
February, 2023
118
May, 2019
96
May, 2022
94
December, 2017
89
July, 2019
80
April, 2019
66
November, 2018
50
March, 2020
47
September, 2023
40
May, 2024
40
September, 2020
39
February, 2018
24
February, 2020
23
October, 2018
19
April, 2020
18
October, 2017
15
May, 2023
12
January, 2019
11
July, 2018
10
April, 2018
10
December, 2019
8
December, 2018
7
January, 2018
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
66
fastq
65
bam
61
bigWig
58
bed narrowPeak
58
bigBed narrowPeak
7
bed bed3+
7
bed broadPeak
7
bigBed broadPeak
3
bed bedMethyl
3
bigBed bedMethyl
1
csv
Organism
66
Homo sapiens
Biosample type
46
cell line
19
tissue
1
primary cell
Organ
53
liver
15
blood
bodily fluid
9
spleen
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
66
AMP
Genome assembly (visualization)
61
GRCh38
56
hg19
Lab
66
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_title!
RRBS
organ_slims!
pancreas
bodily fluid
BIOSAMPLE
ASSAY
66 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
single cell RNA-seq
cell line
HepG2
45
1
tissue
spleen
6
1
2
liver
4
2
brain
2
omental fat pad
1
right lobe of liver
1
primary cell
pancreatic cell
1
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