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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
total RNA-seq
11
ChIP-seq
5
pCHi-C
2
WGBS
1
ATAC-seq
RRBS
Assay category
19
Transcription
11
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
9
control
2
histone
2
histone modification
2
narrow histone mark
Date released
21
October, 2019
5
November, 2018
4
December, 2018
4
February, 2023
1
February, 2020
1
January, 2019
1
June, 2019
1
March, 2020
Available data
bed narrowPeak
31
bam
24
fastq
22
bigWig
19
bigBed narrowPeak
6
tsv
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
Organism
38
Homo sapiens
Biosample type
37
tissue
1
primary cell
Organ
730
pancreas
608
connective tissue
478
adipose tissue
367
epithelium
348
liver
200
heart
167
kidney
151
bone element
102
vasculature
101
blood vessel
81
brain
67
artery
31
musculature of body
30
limb
27
eye
23
embryo
20
lung
16
nerve
15
blood
15
bodily fluid
11
spleen
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
38
AMP
Genome assembly (visualization)
2
GRCh38
Lab
38
AMP-T2D consortium
assay_title!
RRBS
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
38 results
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Clear Filters
total RNA-seq
ChIP-seq
pCHi-C
WGBS
ATAC-seq
tissue
islet of Langerhans
14
2
4
1
spleen
8
1
2
retina
3
pigmented layer of retina
2
primary cell
retinal pigment epithelial cell
1
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