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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
2
Hi-C
1
total RNA-seq
Assay category
16
DNA binding
2
3D chromatin structure
1
Transcription
Target of assay
13
control
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Date released
17
October, 2019
1
February, 2020
1
March, 2020
Available data
62
bam
bigWig
40
bed narrowPeak
39
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
5
tsv
4
bed bed3+
2
hic
1
bedpe bed3+
1
tar
Organism
19
Homo sapiens
Biosample type
12
tissue
7
primary cell
Organ
321
pancreas
219
kidney
217
epithelium
167
heart
167
liver
113
connective tissue
101
bone element
80
blood vessel
80
vasculature
66
adipose tissue
62
brain
56
artery
54
eye
31
limb
23
musculature of body
20
lung
16
skeleton
14
blood
14
bodily fluid
12
nerve
9
spleen
8
embryo
7
vein
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
19
AMP
Genome assembly (visualization)
2
hg19
Lab
19
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
RRBS
files.file_type!
bigWig
BIOSAMPLE
ASSAY
19 results
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Clear Filters
ChIP-seq
Hi-C
total RNA-seq
tissue
tibial nerve
11
1
primary cell
endothelial cell of umbilical vein
5
2
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