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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
2
DNase-seq
1
FAIRE-seq
RRBS
1
total RNA-seq
Assay category
17
DNA binding
3
DNA accessibility
1
Transcription
Target of assay
15
histone
15
histone modification
9
broad histone mark
6
narrow histone mark
2
control
Date released
20
October, 2019
1
July, 2019
Available data
21
bam
16
bigWig
13
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
hic
1
bedpe bed3+
1
tar
1
tsv
Organism
21
Homo sapiens
Biosample type
21
primary cell
Organ
937
pancreas
787
liver
683
connective tissue
512
epithelium
491
adipose tissue
388
heart
349
kidney
284
brain
232
vasculature
227
blood vessel
159
bone element
141
artery
122
limb
89
musculature of body
69
blood
69
bodily fluid
60
eye
43
nerve
37
embryo
25
spleen
20
lung
20
vein
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
21
AMP
Genome assembly (visualization)
16
hg19
13
GRCh38
Lab
21
AMP-T2D consortium
assay_title!
RRBS
files.file_type!
hic
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
DNase-seq
FAIRE-seq
total RNA-seq
primary cell
endothelial cell of umbilical vein
17
2
1
pericardium fibroblast
1
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