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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
114
ChIP-seq
Assay category
114
DNA binding
Target of assay
114
histone
114
histone modification
57
broad histone mark
56
narrow histone mark
49
transcription factor
38
control
11
RNA binding protein
3
chromatin remodeller
Date released
37
August, 2017
26
December, 2017
21
May, 2021
16
February, 2018
14
August, 2021
Available data
81
bam
80
bed narrowPeak
80
bigWig
67
fastq
26
tagAlign
12
bigBed narrowPeak
10
bed bed3+
Organism
114
Homo sapiens
Biosample type
628
tissue
237
primary cell
112
in vitro differentiated cells
38
cell line
2
stem cell
Organ
37
connective tissue
15
epithelium
12
embryo
12
liver
1
pancreas
Project
114
AMP
Genome assembly (visualization)
80
GRCh38
79
hg19
Lab
94
AMP-T2D consortium
20
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
9
inconsistent control read length
assay_title!
STARR-seq
BIOSAMPLE
ASSAY
114 results
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ChIP-seq
in vitro differentiated cells
adipocyte
37
embryonic stem cell
22
neural progenitor cell
14
hepatocyte
12
pancreatic endoderm
10
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stem cell
hESC
2
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