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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ChIP-seq
Assay category
26
DNA binding
Target of assay
924
histone modification
923
histone
479
narrow histone mark
458
transcription factor
443
broad histone mark
314
control
99
RNA binding protein
89
recombinant protein
26
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
15
November, 2017
5
November, 2018
3
August, 2017
3
December, 2017
Available data
26
bam
26
bed narrowPeak
26
bigWig
26
fastq
24
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
Organism
26
Homo sapiens
Biosample type
20
cell line
3
in vitro differentiated cells
2
tissue
1
primary cell
Organ
23
liver
blood
10
bodily fluid
2
connective tissue
1
epithelium
Project
26
AMP
Genome assembly (visualization)
26
hg19
24
GRCh38
Lab
26
AMP-T2D consortium
Audit category:
2
inconsistent control
Audit category:
6
missing controlled_by
Audit category:
13
inconsistent control read length
8
inconsistent control run_type
assay_title!
STARR-seq
month_released!
May, 2019
organ_slims!
blood
BIOSAMPLE
ASSAY
26 results
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ChIP-seq
cell line
HepG2
20
in vitro differentiated cells
adipocyte
2
hepatocyte
1
tissue
liver
2
primary cell
skeletal muscle myoblast
1
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