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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
ChIP-seq
15
total RNA-seq
Assay category
89
DNA binding
15
Transcription
Target of assay
47
histone
47
histone modification
42
transcription factor
control
24
narrow histone mark
23
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
712
February, 2021
390
May, 2021
361
August, 2017
335
November, 2017
318
May, 2020
302
August, 2021
275
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
105
July, 2019
97
May, 2019
82
November, 2018
73
December, 2017
73
September, 2018
66
April, 2019
64
March, 2020
59
November, 2019
59
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
40
May, 2024
31
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
20
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
November, 2020
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
104
bam
104
fastq
103
bigWig
88
bed narrowPeak
50
bigBed narrowPeak
15
tsv
10
bed bed3+
Organism
104
Homo sapiens
Biosample type
66
in vitro differentiated cells
36
tissue
2
stem cell
Organ
50
liver
19
embryo
16
epithelium
Project
104
AMP
Genome assembly (visualization)
103
GRCh38
103
hg19
Lab
104
AMP-T2D consortium
Audit category:
27
inconsistent control
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
13
inconsistent control read length
assay_title!
STARR-seq
target.investigated_as!
control
BIOSAMPLE
ASSAY
104 results
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Clear Filters
ChIP-seq
total RNA-seq
in vitro differentiated cells
pancreatic endoderm
13
4
hepatocyte
14
definitive endodermal cell
6
2
primitive gut cell
6
2
Posterior foregut
4
+ See 5 more…
tissue
liver
29
right lobe of liver
7
stem cell
hESC
2
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