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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
365
ChIP-seq
Assay category
365
DNA binding
Target of assay
242
transcription factor
86
histone
86
histone modification
69
control
66
recombinant protein
50
broad histone mark
36
narrow histone mark
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
649
February, 2021
403
August, 2017
394
May, 2021
365
November, 2017
341
May, 2020
307
August, 2021
267
October, 2019
207
June, 2019
200
May, 2022
170
February, 2023
168
July, 2018
96
July, 2019
90
December, 2017
76
April, 2019
73
September, 2018
68
May, 2019
67
November, 2018
65
October, 2018
60
March, 2020
60
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
33
December, 2018
24
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
351
bam
295
bigWig
283
fastq
276
bed narrowPeak
275
bigBed narrowPeak
78
tagAlign
61
bed broadPeak
55
bigBed broadPeak
2
tar
Organism
365
Homo sapiens
Biosample type
281
cell line
82
tissue
2
primary cell
Organ
281
liver
88
brain
4
epithelium
vasculature
2
blood vessel
Project
365
AMP
Genome assembly (visualization)
247
GRCh38
243
hg19
Lab
365
AMP-T2D consortium
Audit category:
8
missing controlled_by
Audit category:
16
inconsistent control read length
2
inconsistent control run_type
assay_title!
STARR-seq
organ_slims!
vasculature
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
365 results
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ChIP-seq
cell line
HepG2
281
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
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primary cell
astrocyte of the cerebellum
2
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