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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
361
ChIP-seq
Assay category
361
DNA binding
Target of assay
235
transcription factor
87
histone
87
histone modification
71
control
66
recombinant protein
50
broad histone mark
37
narrow histone mark
RNA binding protein
11
chromatin remodeller
2
other context
2
other post-translational modification
Date released
715
February, 2021
394
May, 2021
365
August, 2017
361
November, 2017
341
May, 2020
314
October, 2019
313
August, 2021
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
115
May, 2019
108
July, 2019
89
December, 2017
76
April, 2019
65
October, 2018
64
March, 2020
64
November, 2018
60
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
41
September, 2018
39
February, 2018
35
May, 2024
33
December, 2018
25
February, 2020
24
January, 2019
19
April, 2020
19
October, 2017
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
347
bam
291
bigWig
279
fastq
270
bed narrowPeak
269
bigBed narrowPeak
78
tagAlign
63
bed broadPeak
57
bigBed broadPeak
2
tar
Organism
361
Homo sapiens
Biosample type
273
cell line
82
tissue
6
primary cell
Organ
273
liver
88
brain
4
epithelium
4
vasculature
2
blood vessel
Project
361
AMP
Genome assembly (visualization)
247
GRCh38
239
hg19
Lab
361
AMP-T2D consortium
Audit category:
missing controlled_by
Audit category:
15
inconsistent control read length
assay_title!
STARR-seq
target.investigated_as!
RNA binding protein
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
361 results
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Clear Filters
ChIP-seq
cell line
HepG2
273
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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