Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
209
DNase-seq
66
ATAC-seq
21
snATAC-seq
5
FAIRE-seq
Assay category
801
DNA binding
301
DNA accessibility
52
Transcription
Date released
187
June, 2019
60
May, 2022
14
September, 2018
12
October, 2019
10
August, 2017
10
November, 2018
5
September, 2017
2
July, 2019
1
November, 2020
Available data
492
bed narrowPeak
389
bam
350
bigWig
241
bigBed narrowPeak
209
bed bed3+
208
bed broadPeak
206
bigBed broadPeak
102
fastq
64
xls
60
zippedFastqFolder
14
tsv
12
bed bed3
7
bed bedgraph
4
txt
1
tar
Organism
301
Homo sapiens
Biosample type
184
tissue
112
primary cell
3
in vitro differentiated cells
2
cell line
Organ
80
kidney
79
epithelium
71
pancreas
36
limb
33
brain
33
musculature of body
30
heart
18
ureter
13
connective tissue
12
vasculature
10
blood vessel
6
liver
4
adipose tissue
4
artery
4
eye
3
vein
2
nerve
1
spleen
Project
241
AMP
60
HPAP
Genome assembly (visualization)
231
GRCh38
218
hg19
Lab
241
AMP-T2D consortium
60
Klaus Kaestner, Upenn
Audit category:
4
inconsistent ontology term
assay_title!
WGBS
BIOSAMPLE
ASSAY
301 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ATAC-seq
snATAC-seq
FAIRE-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
1
muscle of leg
13
+ See 42 more…
primary cell
pancreatic alpha cell
28
Langerhans cell
21
pancreatic beta cell
20
pancreatic acinar cell
9
pancreatic ductal cell
4
+ See 23 more…
in vitro differentiated cells
adipocyte
1
2
cell line
Panc1
1
glomerular visceral epithelial cell
1
See all biosamples
Download