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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
85
single cell RNA-seq
ATAC-seq
48
snATAC-seq
WGBS
3
Hi-C
Assay category
177
Transcription
48
DNA accessibility
3
3D chromatin structure
Date released
76
February, 2023
56
September, 2020
54
May, 2022
39
February, 2021
3
October, 2022
Available data
153
fastq
73
zippedFastqFolder
3
bedpe bed3+
3
cool
3
hic
Organism
228
Homo sapiens
Biosample type
228
primary cell
Organ
56
epithelium
56
pancreas
Project
3753
AMP
233
T1D
228
HPAP
47
KPMP
19
LungMap
4
community
1
ITG
Genome assembly (visualization)
3
hg19
Lab
228
Klaus Kaestner, Upenn
Audit category:
30
audit script error
assay_title!
WGBS
ATAC-seq
BIOSAMPLE
ASSAY
228 results
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total RNA-seq
single cell RNA-seq
snATAC-seq
Hi-C
primary cell
Langerhans cell
85
48
pancreatic alpha cell
42
1
exocrine cell
39
pancreatic beta cell
11
1
pancreatic acinar cell
1
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