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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
Assay category
22
DNA binding
Target of assay
353
transcription factor
89
recombinant protein
83
control
62
RNA binding protein
38
histone
38
histone modification
22
chromatin remodeller
19
broad histone mark
19
narrow histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
11
November, 2017
6
January, 2019
3
November, 2018
2
December, 2018
Available data
22
bam
22
bed narrowPeak
22
bigBed narrowPeak
22
bigWig
22
fastq
4
bed broadPeak
4
bigBed broadPeak
Organism
22
Homo sapiens
Biosample type
22
cell line
3
in vitro differentiated cells
2
tissue
1
primary cell
Organ
12
liver
10
blood
10
bodily fluid
Project
22
AMP
Genome assembly (visualization)
22
GRCh38
22
hg19
Lab
22
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
11
inconsistent control read length
inconsistent control run_type
assay_title!
WGBS
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
cell line
HepG2
12
GM12878
10
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