Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
DNase-seq
4
Hi-C
2
total RNA-seq
1
FAIRE-seq
Assay category
DNA binding
5
DNA accessibility
4
3D chromatin structure
2
Transcription
Date released
4
July, 2019
4
October, 2019
2
June, 2019
1
March, 2020
Available data
9
bigWig
7
bam
6
bed bed3+
5
bed narrowPeak
5
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
hdf5
2
hic
2
tsv
1
bedpe bed3+
1
tar
Organism
11
Homo sapiens
Biosample type
60
cell line
58
tissue
11
primary cell
Organ
267
epithelium
229
pancreas
27
connective tissue
21
kidney
14
vasculature
12
brain
11
blood vessel
10
liver
8
blood
8
bodily fluid
8
heart
5
vein
4
musculature of body
2
adipose tissue
2
artery
2
eye
1
bone element
1
bone marrow
1
pericardium
Project
11
AMP
Genome assembly (visualization)
10
hg19
6
GRCh38
Lab
11
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
WGBS
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
11 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
Hi-C
total RNA-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
2
2
1
brain microvascular endothelial cell
1
1
endothelial cell of coronary artery
1
endothelial cell of hepatic sinusoid
1
kidney capillary endothelial cell
1
+ See 1 more…
See all biosamples
Download