Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
3
single cell RNA-seq
Assay category
24
DNA binding
3
Transcription
Target of assay
218
histone
218
histone modification
114
broad histone mark
104
narrow histone mark
27
control
6
RNA binding protein
6
transcription factor
1
chromatin remodeller
Date released
13
August, 2017
June, 2019
3
July, 2019
3
May, 2021
3
November, 2017
3
October, 2019
1
August, 2021
1
May, 2019
Available data
24
bam
16
fastq
10
bigWig
3
tsv
2
tagAlign
Organism
27
Homo sapiens
Biosample type
187
tissue
83
cell line
37
in vitro differentiated cells
27
primary cell
1
stem cell
Organ
19
epithelium
12
pancreas
6
brain
4
vasculature
3
blood vessel
2
kidney
2
vein
1
liver
Project
27
AMP
Genome assembly (visualization)
10
hg19
3
GRCh38
Lab
24
AMP-T2D consortium
3
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
assay_title!
WGBS
month_released!
June, 2019
BIOSAMPLE
ASSAY
27 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
single cell RNA-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
CD8-positive, alpha-beta T cell
3
cerebellar granule cell
2
endothelial cell of umbilical vein
2
+ See 8 more…
See all biosamples
Download