Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
121
ChIP-seq
Assay category
121
DNA binding
Target of assay
66
control
55
histone
55
histone modification
33
broad histone mark
22
narrow histone mark
Date released
48
August, 2017
23
May, 2020
23
November, 2017
9
October, 2019
8
August, 2021
8
October, 2017
1
February, 2021
1
May, 2021
Available data
3191
bam
2998
bigWig
bed narrowPeak
1526
tsv
1335
fastq
959
bigBed narrowPeak
392
tagAlign
305
bed broadPeak
268
bigBed broadPeak
260
bed bed3+
161
txt
112
zippedFastqFolder
64
xls
21
bedpe bed3+
20
hic
18
bed bedMethyl
18
bigBed bedMethyl
12
bed bed3
8
csv
7
bed bedgraph
3
cool
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
120
Homo sapiens
Biosample type
93
tissue
22
in vitro differentiated cells
4
cell line
2
primary cell
Organ
47
liver
35
brain
21
connective tissue
7
adipose tissue
5
pancreas
2
artery
2
blood vessel
2
epithelium
2
heart
2
musculature of body
vasculature
Project
121
AMP
Genome assembly (visualization)
4
hg19
Lab
121
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
assay_title!
WGBS
files.file_type!
bed narrowPeak
organ_slims!
vasculature
BIOSAMPLE
ASSAY
121 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
liver
43
brain
8
cingulate gyrus
7
subcutaneous abdominal adipose tissue
7
layer of hippocampus
4
+ See 15 more…
in vitro differentiated cells
adipocyte
14
neural progenitor cell
7
pancreatic PP cell
1
cell line
HepG2
3
iPSC derived cell line
1
primary cell
hepatocyte
1
skeletal muscle myoblast
1
See all biosamples
Download