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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
2
total RNA-seq
Assay category
73
DNA binding
2
Transcription
Target of assay
29
control
29
histone
29
histone modification
19
broad histone mark
15
transcription factor
11
RNA binding protein
10
narrow histone mark
Date released
709
February, 2021
399
May, 2021
386
August, 2017
385
November, 2017
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
168
July, 2018
159
May, 2022
120
May, 2019
96
July, 2019
83
December, 2017
80
April, 2019
76
November, 2018
75
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
37
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2023
4
August, 2018
4
March, 2019
4
October, 2022
3
June, 2018
1
August, 2022
Available data
75
bam
59
fastq
46
bigWig
44
bed narrowPeak
44
bigBed narrowPeak
2
tsv
Organism
75
Homo sapiens
Biosample type
73
tissue
2
primary cell
Organ
52
pancreas
23
adipose tissue
23
connective tissue
2
epithelium
Project
75
AMP
Genome assembly (visualization)
46
GRCh38
46
hg19
Lab
75
AMP-T2D consortium
Audit category:
inconsistent control read length
assay_title!
WGBS
lab.title!
Maike Sander, UCSD
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
75 results
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Clear Filters
ChIP-seq
total RNA-seq
tissue
body of pancreas
32
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
pancreas
2
primary cell
pancreatic acinar cell
2
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