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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
single cell RNA-seq
49
ATAC-seq
48
snATAC-seq
WGBS
3
Hi-C
Assay category
97
DNA accessibility
92
Transcription
3
3D chromatin structure
Date released
76
February, 2023
60
May, 2022
27
February, 2021
19
September, 2020
7
August, 2020
3
October, 2022
Available data
129
fastq
60
zippedFastqFolder
10
bigWig
3
bedpe bed3+
3
cool
3
hic
Organism
192
Homo sapiens
Biosample type
192
primary cell
Organ
105
epithelium
105
pancreas
Project
192
HPAP
Genome assembly (visualization)
10
GRCh38
3
hg19
Lab
3673
AMP-T2D consortium
343
Kyle Gaulton, UCSD
192
Klaus Kaestner, Upenn
131
Katalin Susztak, Upenn
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
38
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
10
Xin Sun, UCSD
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
30
audit script error
assay_title!
WGBS
single cell RNA-seq
BIOSAMPLE
ASSAY
192 results
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total RNA-seq
ATAC-seq
snATAC-seq
Hi-C
primary cell
pancreatic alpha cell
42
29
1
Langerhans cell
48
exocrine cell
39
pancreatic beta cell
11
16
1
pancreatic acinar cell
4
1
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