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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
85
single cell RNA-seq
49
ATAC-seq
48
snATAC-seq
WGBS
Assay category
177
Transcription
97
DNA accessibility
Date released
93
May, 2022
76
February, 2023
59
September, 2020
39
February, 2021
7
August, 2020
Available data
163
fastq
112
zippedFastqFolder
10
bigWig
Organism
274
Homo sapiens
Biosample type
274
primary cell
Organ
102
epithelium
102
pancreas
Project
274
HPAP
Genome assembly (visualization)
10
GRCh38
hg19
Lab
959
AMP-T2D consortium
274
Klaus Kaestner, Upenn
141
Katalin Susztak, Upenn
105
Kyle Gaulton, UCSD
47
KPMP
21
Bing Ren, UCSD
20
Karen Mohlke, UNC
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Anna Gloyn, Oxford
1
ITG
1
Maike Sander, UCSD
1
Mark McCarthy, Oxford
Audit category:
27
audit script error
assay_title!
WGBS
assembly!
hg19
BIOSAMPLE
ASSAY
274 results
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total RNA-seq
single cell RNA-seq
ATAC-seq
snATAC-seq
primary cell
Langerhans cell
85
48
pancreatic alpha cell
42
29
exocrine cell
39
pancreatic beta cell
11
16
pancreatic acinar cell
4
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