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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ATAC-seq
Assay category
6
DNA accessibility
Date released
5
February, 2023
1
February, 2021
Available data
2583
bam
2389
bigWig
1547
bed narrowPeak
1243
fastq
1116
tsv
819
bigBed narrowPeak
376
tagAlign
161
txt
131
bed broadPeak
112
zippedFastqFolder
95
bigBed broadPeak
65
bed bed3+
64
xls
23
hic
22
bedpe bed3+
18
bed bedMethyl
18
bigBed bedMethyl
8
csv
6
bed bed3
4
hdf5
4
tar
3
bed bedgraph
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
6
Homo sapiens
Biosample type
5
tissue
1
cell line
Organ
connective tissue
4
bone element
4
skeleton
1
brain
1
liver
Project
6
AMP
Genome assembly (visualization)
6
hg19
1
GRCh38
Lab
6
AMP-T2D consortium
Audit category:
1
inconsistent replicate
assay_title!
WGBS
month_released!
June, 2019
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
6 results
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ATAC-seq
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
cell line
HepG2
1
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