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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
100
ATAC-seq
93
ChIP-seq
1
pCHi-C
Assay category
190
Transcription
100
DNA accessibility
93
DNA binding
Target of assay
87
histone
87
histone modification
50
narrow histone mark
37
broad histone mark
control
6
transcription factor
4
RNA binding protein
Date released
706
February, 2021
390
May, 2021
352
August, 2017
335
November, 2017
318
May, 2020
307
August, 2021
275
October, 2019
210
June, 2019
205
February, 2023
168
July, 2018
159
May, 2022
97
May, 2019
93
July, 2019
75
November, 2018
73
December, 2017
73
September, 2018
66
April, 2019
64
March, 2020
59
November, 2019
59
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
40
May, 2024
31
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
20
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
November, 2020
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
325
bam
325
bigWig
189
tsv
92
bed narrowPeak
64
bigBed narrowPeak
27
tagAlign
Organism
384
Homo sapiens
Biosample type
236
tissue
147
primary cell
1
cell line
Organ
171
liver
47
heart
19
kidney
Project
339
AMP
45
T1D
Genome assembly (visualization)
325
hg19
271
GRCh38
Lab
339
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
assay_title!
WGBS
target.investigated_as!
control
BIOSAMPLE
ASSAY
384 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
liver
143
27
heart left ventricle
29
kidney
19
heart right ventricle
11
heart
7
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
+ See 24 more…
cell line
HepG2
1
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