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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
146
total RNA-seq
82
single cell RNA-seq
77
ATAC-seq
WGBS
22
snATAC-seq
Assay category
228
Transcription
99
DNA accessibility
Date released
709
February, 2021
406
November, 2017
402
August, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
168
July, 2018
159
May, 2022
120
May, 2019
96
July, 2019
94
December, 2017
81
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
188
bam
184
bigWig
164
tsv
93
zippedFastqFolder
74
fastq
38
bed narrowPeak
7
txt
1
bed bed3+
Organism
327
Homo sapiens
Biosample type
186
tissue
141
primary cell
Organ
220
pancreas
72
epithelium
40
liver
2
connective tissue
2
musculature of body
Project
234
AMP
93
HPAP
Genome assembly (visualization)
203
hg19
164
GRCh38
Lab
170
AMP-T2D consortium
93
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
Audit category:
6
inconsistent ontology term
1
audit script error
assay_title!
WGBS
BIOSAMPLE
ASSAY
327 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ATAC-seq
snATAC-seq
tissue
islet of Langerhans
126
18
liver
20
20
skeletal muscle tissue
1
1
primary cell
Langerhans cell
33
21
pancreatic alpha cell
7
22
pancreatic beta cell
9
13
pancreatic acinar cell
5
4
pancreatic delta cell
4
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