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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
5
total RNA-seq
3
DNase-seq
2
ATAC-seq
WGBS
Assay category
55
DNA binding
5
DNA accessibility
5
Transcription
Target of assay
30
histone
30
histone modification
20
broad histone mark
19
control
10
narrow histone mark
6
transcription factor
3
other context
3
other post-translational modification
Date released
42
October, 2019
7
December, 2018
7
January, 2019
7
November, 2018
1
February, 2020
March, 2020
1
October, 2017
Available data
64
bam
45
bigWig
41
bed narrowPeak
39
bigBed narrowPeak
22
fastq
5
tsv
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
Organism
65
Homo sapiens
Biosample type
65
tissue
Organ
881
pancreas
783
liver
676
connective tissue
484
adipose tissue
471
epithelium
378
heart
352
kidney
284
brain
230
vasculature
224
blood vessel
159
bone element
141
artery
121
limb
90
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
22
spleen
21
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
bone marrow
1
lymph node
1
skin of body
1
spinal cord
1
thymus
Project
65
AMP
Genome assembly (visualization)
45
GRCh38
45
hg19
Lab
65
AMP-T2D consortium
assay_title!
WGBS
month_released!
March, 2020
BIOSAMPLE
ASSAY
65 results
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Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
35
5
2
1
spleen
20
1
1
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